Skip to main content

Introduction to bioimage analysis and CellProfiler

Introduction to bioimage analysis and CellProfiler
Key Points
Instructor Notes
Extract All Images
- Reference

Search the All In One page

Introduction to bioimage analysis and CellProfiler

%

Learner View

EPISODES

Summary and Schedule

1. Introduction to the BBBC021 dataset

2. Reading images

3. Identifying primary objects

4. Identifying secondary & tertiary objects

5. Measuring object intensity and shape

6. Reproducibility in CellProfiler

7. Bonus: visualising features

8. Advanced: classifying cells in CellProfiler Analyst

Key Points
Instructor Notes
Extract All Images

Reference

See all in one page

Learner Profiles

This is a placeholder file. We will not be using this section during the exercise.

This lesson is subject to the Code of Conduct

Edit on GitHub | Contributing | Source

Cite | Contact | About

Materials licensed under CC-BY 4.0 by the authors

Template licensed under CC-BY 4.0 by The Carpentries

Built with sandpaper (0.20.0), pegboard (0.7.9), and varnish (1.0.9)